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[1-100] [101-200] [201-300] [301-400] [401-500] [501-600] [601-700] [701-800] [801-900] [901-1000] [1001-1100] [1101-1200] [1201-1300] [1301-1400] [1401-1500] [1501-1600] [1601-1700] [1701-1800] [1801-1900] [1901-2000] [2001-2100] [2101-2200] [2201-2300] [2301-2400] [2401-2411]


18S rDNA from 40 beetle species

Data matrix used in Maddison, D.R., Baker, M.D., and Ober, K.A. In press.A preliminary phylogenetic analysis of 18S ribosomal DNA of carabid beetles (Coleoptera: Carabidae). Boll. Mus. reg. Sci. nat. Torino.

Sites 201 through 300

Calybe        ATCAAAACCAATCGGCAGCGATAGCA-----TTTCGGTGTTAT----CGTTTGTCGCTC----AATAAATGGTGAATCTGAATAACTTTATGCTGATCGC
Cymindis      ATCAAAACCAATCGGCGTCGATAGTG-----TTTCGGCATTAT----CGTTCGTCGCTC----AATAAATGGTGAATCTGAATAACTTTATGCTGATCGC
Amara         ATCAAAACCAATCGGCGGCGATAGCG-----TTTCGGCGTTAT----CGTTCGTCGCTC----AATAAATGGTGAATCTGAATAACTTTATGCTGATCGC
Agonum        ATCAAAACTAATCGGCGGCGGTAGCA-----TTTCGGTGTTAT----CGTTCGTCGCTC----AATAAATGGTGAATCTGAATAACTTTATGCTGATCGC
Discoderus    ATCAAAACCAATCGGCAGCAGTAACA-----TTTCGGTGTTAT----TGTTTGTCGCTC----AATATATGGTGAATCTGAATAACTTTATGCTGATCGC
Chlaenius     ATCAAAACCAATCGGCGGCGGTAACG-----TTTCGGCGTTAT----CGTTCGTCGCTC----AATAAATGGTGAATCTGAATAACTTTATGCTGATCGC
Loxandrus     ATCAAAACCAATCGGTGGCAATATCA-----TTTCGGTGTTAT----TGTTCATCGCTC----AATAAATGGTGAATCTGAATAACTTTATGCTGATCGC
Pterostichus  ATCAAAACCAATCGGCGGCGGTAGCA-----TTTCGGTGTTAT----CGTTCGTCGCTC----AATATATGGTGAATCTGAATAACTTTATGCTGATCGC
Galerita      ATCAAAACCAATCGGCGGCGGTAATA-----TTTCGGTATTAT----CGTTCGTCGCTATAA-ATTGAATGGTGAATCTGAATAACTTTATGCTGATCGC
Pseudaptinus  ATCAAAACTAATCGGCGACGGTAACA-----TTACGGTGTTATC---CGTTCGTTGTATATA-TATTAATGGTGAATCTGAATAACTTTATGCTGATCGC
Pseudomorpha  ATCAAAACTAATCGATTGCGGTATAAACA--TTTCGGTGTTTTAT--CGTATATCGTATATA-AATAAATGGTGAATCTGAATAACTTTAAGCTGATCGC
Morion        ATCAAAACTAATCGGCGTCGGTAATA-----TTTCGGTATTAT----CGTTCGTCGCATAA--AACTTATGGTGAATCTGAATAACTTTATGCTGATCGC
Psydrus       ATCAAAACCAATCGGCGGCGGTGTC------TTTGCGA--TGC----CGTTCGTCGC------ATTGTTTGGTGACTCTGAATAACTTTTGGCTGATCGC
Diplous       ATCAAAACCAATCGGCGGCAGTACTG-----CTTCGGCTTTGC----TGTTCGTCGCAC------TTTTTGGTGACTCTGAATAACTTTTGGCTGATCGC
Patrobus      ATCAAAACCAATCGGCGGCAGTTATG-----TTTCGGCATTAC----TGTGCAGTCGCAC-----TGTTTGGTGACTCTGAATAACTTTTGGCTGATCGC
Zolus         ATCAAAACCAATCGGCGGCAGTAGCG-----CTACGGCGTACTC---TGTTCGTCGCAC------TTTTTGATGACTCTGAATAACTTTTGGCTGATCGC
Sloaneana     TTCAAAATCAATCGGCGGCAATAGCG-----TTTCGGCGTTAT----TGTTCGTCGCAC------TGTATGGTGACTCTGAATAACTCTCAGCTGATCGC
Diplochaetus  ATCAAAACCAATCGGCGGCAGTAGCG-----TTTCGGCGTTAT----TGTTCGTCGCAC------TGTTTGGTGACTCTGAATAACTTTTGGCTGATCGC
Pericompsus   ATCAAAACCAATCGGCGGCAGTAGCC-----TCACGG--TTAT----TGTTCGTCGCAC------TGTTTGGTGACTCTGAATAACTTTTGGCTGATCGC
Bembidion     ATCAAAACCAATCGGCGTCAGTAGCG-----TTTCGGCGTTGC----TGTTCGTCGCAC------TTTTTGGTGACTCTGAATAACTTTTGGCTGATCGC
Asaphidion    ATTAAAACCAATCGGCGTCAGTAGCG-----TTTCGGCGTTGC----TGTTCGTCGCAC------TGCTTGGTGACTCTGAATAACTTTTGGCTGATCGC
Trechus       ATCAAAACCAATCGGCGGCAATAGAG-----TTTCGGCTTTAT----TGTTCGTCGCAC------TTTTTGGTGACTCTGAATAACTTTTGGCTGATCGC
Pasimachus    ATCAAAACTAATCGATGTC-GGA--ATTTTTTTTCCGT---------TTATCGTAAATTTTT---TATGTGTTGAATCTGAATAACTTT-TGCTGATCGC
Scarites      ATCAAAACCAATCGATGTTTGGATGATTTTTTTTTAATTTTATCC--ATTACATCGTATATA-TATTTGTGGTGAGTCTGAATAACTTT-TGCTGATCGC
Clivina       AACAAAATCAATCGGCTACGATTAT------TTTCGGATAATT----CGTATGTCGTAC------TATATGGTGAATCTGAATAACTTTATGCTGATCGC
Schizogenius  ATCAAAACCAATCGGCAACGGTTACT-----CTTTTTAAGGGTTTATCGTTCGTCGTTT------AATTTGGTGACTCTGAATAACTTTATGCTGATCGC
Dyschirius    ATCAAAACCAATCGGCGGCGGTG--------CTTCGGCAT-------CGTTTGTCGTCC------TATTTGGTGACTCTGAATAACTTTATGCTGATCGC
Loricera      ATCAAAACCAATCGGTAGACGGGTCCG-----TTACGGCGGTCTC--CGTTTATCGTAC----ACCAAATGGTGACTCTGAATAACTTT-TGCTGATCGC
Calosoma      ATCAAAACCAATCGGCGGC-GTGTTCGC----TTGCGTTCA------CGTTCGCCGC------CCAACTTGGTGACTCTGAATAACTTTCTGCTGATCGC
Scaphinotus   ATCAAAACCAATCGGTGGC-GGGTTCGCG---TTCGCG---------CGTTCACGTCCACCGTCAATAATGGTGACTCTGAATAACTTTATGCTGATCGC
Elaphrus      ATCAAAGCCAATCGGCGTCTGGGTTCGCC------------------CGTTCGCCGCCC------TCATTGGTGACTCTGAATAACTTTTGGCTGATCGC
Blethisa      ATCAAAACCAATCGGCGAC-GGGTTCGCT------------------CGTTCGCCGCCC------TGTTTGGTGACTCTGAATAACTTTTGGCTGATCGC
Notiophilus   ATCAAAACCAATCGGCGGCGGGCACTTGTGTC---------------CGTTCGTCGCCC------TACTTGGTGACTCTGAATAACTTTATGCTGATCGC
Nebria        ATCAAAACCAATCGGCGGCAGGCACTTGTGTC---------------TGTTCGTCGCCC------TTTTTGGTGACTCTGAATAACTTTATGCTGATCGC
Leistus       ATCAAAACCAATCGGCGGCAGGCACTTGTGTC---------------TGTTCGTCGCCC------TACTTGGTGACTCTGAATAACTTTATGCTGATCGC
T. holmbergi  ATCAAAACCAATCGGCGGCGGTCGCTTGCGAT---------------CGTTCGCCGGCA------CACTTGGTGACTCTGAATAACTTTATGCTGATCGC
T. gibbsii    ATCAAAACCCATCGGCGGCGGTCGCTTGCGAT---------------CGTTCGCCGGCA------CACTTGGTGACTCTGAATAACTTTATGCTGATCGC
Tenebrio      ATCAAAACCAATCGGTGGCGG-TCTCCGTCAT---------------CGT-------AC------AACTTGGTGACTCTGAATAACTTTACGCTGATCGC
Dynastes      ATCAAAACCAATCGGTGGCGGGTC-TTA--CT---------------CGT-CATCGTAC------ACCTTGGTGACTCTGAATAACTTCTTGCTGATCGC
Xanthopygus   ATCAAAACCAATCGGTGGCGGGTTCGCT-------------------CGT-CATCGTAC------AACTTGGTGACTCTGAATAACTTTTTGCTGATCGC
                            *******==========================************======***                                
Character excluded from all analyses indicated by a = in the line under the matrix; boundary regions indicated by *