firstpreviousnext

[1-100] [101-200] [201-300] [301-400] [401-500] [501-600] [601-700] [701-800] [801-900] [901-1000] [1001-1100] [1101-1200] [1201-1300] [1301-1400] [1401-1500] [1501-1600] [1601-1700] [1701-1800] [1801-1900] [1901-2000] [2001-2100] [2101-2200] [2201-2300] [2301-2400] [2401-2411]


18S rDNA from 40 beetle species

Data matrix used in Maddison, D.R., Baker, M.D., and Ober, K.A. In press.A preliminary phylogenetic analysis of 18S ribosomal DNA of carabid beetles (Coleoptera: Carabidae). Boll. Mus. reg. Sci. nat. Torino.

Sites 2301 through 2400

Calybe        CGATTGAATG-ATTTAGTGAGGTCTTCGGACTGGTACGCGGCA---ATGTTTTT-ACATTACCGATGT-CGCTGGGAAGATGACCAAACTTGATTATTTA
Cymindis      CGATTGAATG-ATTTAGTGAGGTCTTCGGACTGGTACGCGGTG---ATGTTTCG-ACATTACCGATGC-CGCTGGGAAGATGACCAAACTTGATTATTTA
Amara         CGATTGAATG-ATTTAGTGAGGTCTTCGGACTGGTACGCGGTA---ATGTTCCG-ACATTACCGATGT-CGCTGGGAAGATGACCAAACTTGATTATT-A
Agonum        CGATTGAATG-ATTTAGTGAGGTCTTCGGACTGGTACGCGGTG---ATATTTCG-ATATTACCGATGT-CGCTGGGAAGATGACCAAACTTGATTATTTA
Discoderus    CGATTGAATG-ATTTAGTGAGGTCTTCGGACTGGTACGCGGTG---ATGTTTCG-ACATTACCGATGT-CGCTGGGAAGATGACCAAACTTGATTATTTA
Chlaenius     CGATTGAATG-ATTTAGTGAGGTCTTCGGACTGGTACGCGGTG---ATGTTTCG-ATATTACCGATGT-CGCTGGGAAGATGACCAAACTTGATTATTTA
Loxandrus     CGATTGAATG-ATTTAGTGAGGTCTTCGGAATGGTACGCGGTG---ATGTTTCG-ACATTACCGATGT-CGCTGGGAAGATGACCAAACTTGATCATTTA
Pterostichus  CGATTGAATG-ATTTAGTGAGGTCTTCGGACTGGTACGCGGTG---ATGTTTCG-ACATTACCGATGT-CGCTGGGAAGATGACCAAACTTGATTATTTA
Galerita      CGATTGAATG-ATTTAGTGAGGTCTTCGGACTGGTACGCGGTG---ATGTTTCG-ACATTACCGATGT-CGCTGGGAAGATGACCAAACTTGATTATTTA
Pseudaptinus  CGATTGAATG-ATTTAGTGAGGTCTTCGGACTGGTACGCGGTG---ATGTTTCG-ACATTACCGATGT-CGCTAGGAAGATGACCAAACTTGATTATTTA
Pseudomorpha  CGATTGAATG-ATTTAGTGAGGTCTTCGGACTGGTACGCGGTG---ATGTTTCG-ATATTACCGATGT-CGCTGGGAAGATGACCAAACTTGATTATTTA
Morion        CGATTGAATG-ATTTAGTGAGGTCTTCGGACTGGTACGCGGTG---ATATTTCG-ATATTACCGATGT-CGCTGGGAAGATGACCAAACTTGATTATTTA
Psydrus       CGATTGAATG-ATTTAGTGAGGTCTTCGGACTGATACACGGCTC--GTGTTTCG-ACATGGCCGGGGA-CTTTGGGAAGATGACCAAACTTGATCATTTA
Diplous       CGATTGAATG-ATTTAGTGAGGTCTTCAGACTGGTTCGCGGCG---GCGTTTCG-ACTCCGCCGAAGA-AGCTGGGAAGATGACCAAACTTGATATTTTT
Patrobus      CGATTGAATG-ATTTAGTGAGGTCTTCAGACTGGTTCGCGGTG---GCGTTCCG-ACGTCGCCGATGA-CGCTGGGAAGATGACCAAACTTGATCATTTA
Zolus         CGATTGAAAA-ATTTAGTGAGGTCTTCGGACTGGTACGCGGCG---GCGTTTCG-ACACCGCCGATGT-CGCTGGGAAGATGACCAAACTTGATCTTTTA
Sloaneana     CGATTGAATG-ATTTAGTGAGGTCTTCGGAATGGTACGCGGCG---GCGTTTCG-ACATCGCCGAAGT-CGCTGGGAAGATGACCAAACGTGATCATGTT
Diplochaetus  CGATTGAATG-ATTTAGTGAGGTCTTCGGATTGGTACGCGGCG---GCGTTTTT-ACATCTCCGAAGT-CGGTGTGAAGATGACCAGACCTGACAAGTAT
Pericompsus   CGATTGAATG-ATTTAGTGAGGTCTCCGGAATGGTACTCGGCG---GCGTTTCG-ACATCACCGAAGTCACGGTGTCAGATGACCAGACGTGACAAGTTT
Bembidion     TGATTGAATG-ATTTAGTGAGGTCTTCGGACTGGTACGCGGTT---GCGTTTCG----TTGCCGATGT-CGCTGGGAAGATGACCAAACTTGATCATTTA
Asaphidion    CGATTGAATG-ATTTAGTGAGGTCTTCGGACTGGTACGCGGTG---GCGTTTTG-ACGTTGCCGATGT-CGCTGGGAAGATGACCAAACTTGATCATGTA
Trechus       CGATTGAATG-ATTTAGTGAGGTCTTCGGACTGGTACGCGGCC---ACGTTTTT-ACGGGGCCGATGT-CGCTGGGAAGATGACCAAACTTGATTATTTA
Pasimachus    CGATTGAATG-ATTTAGTGAGGTCTTCAGACTGGTACACGGCGA-TGCGTCAAA-ACATTGCTGTTGT-TACCGGGAAGATGACCAAACTTGATTATTTA
Scarites      CGATTGAATG-ATTTAGTGAGGTCTTCAGACTGGAACTCGGCGG-TGCGTAAAA-ACATTGCCGATGT-TTTCGGGAAGATGACCAAACTTGATTATTTA
Clivina       CGATTGAATT-ATTTAGTGAGGTCTTCGGACTGGTACGCGCTGGTGTTTTTACGAACATGGGCGAAGTC-------------------------------
Schizogenius  CGATTGAATG-ATTTAGTGAGGTCTTCGGATCGGTACGCGGCG---GCGT--------------------------------------------------
Dyschirius    CGATTGAATG-ATTTAGTGAGGTCTTCGGACTGGTACGCGGCG---GTGTTTCGATTATTGCCGATGT-CGGTGGGAAGATGACCAAACTTAAAACTGTA
Loricera      CGATTGAATT-ATTTAGTGAGGTCTTCAGACTGGCACCCGGTG---GCGTTTCTAACATCACCGATGT-CGCTGGAAAGATGACCAAACTTGATTATTTA
Calosoma      CGATTGAATG-ATTTAGTGAGGTCTTCGGACTGGTACGCGGCG---GCGTTTCG-ACATCGCCGATGT-CGCTGGGAAGATGACCAAACTTG-TCATTTA
Scaphinotus   GAATTGAAAGAA----------------------------------------------------------------------------------------
Elaphrus      CGATTGAATG-ATTTAGTGAGGTCTTCGGACTGGTACGCGTGG---GTGTTTCG-ACACTTTCGATGT-CGCTGGGAAGATGACCAAACTTG-TCATATA
Blethisa      CGATTGAATG-ATTTAGTGAGGTCTTCAGACCGGTACGCGATA---GTGTTTCG-GCACTTTCGAAGT-CGTTGTGAAGATGACCAGACCTGATCAGTAT
Notiophilus   CGATTGAATG-ATTTAGTGAGGTCTTCGGACTGGTACGCGGCG---GCGTTTCG-ACATCGCCGATGT-CGCTGGGAAGATGACCAAACTTGTCCTGTAT
Nebria        CGATTGAATGAATTTAGTGAG-TCTTCGGACTGGCAATCGGCG---GTGTTTCG-ACTATGCCGAAGAA-------------------------------
Leistus       CGATTGAATG-ATTTAGTGAGGTCTTCGGACGGGTACTCGGCA---GCGTTTCG-ACATTGCCGACGT-CGCTGGGAAGATGACCAAACTTG-TCATTTA
T. holmbergi  CGATTGAATG-ATTTAGTGAGGTCTTCAGACCGGTACGCGATG---ACGTTTCG-ACGTTATCGATGT-CGCTGGGAAGATGACCAAACTTGATCATTTA
T. gibbsii    CGATTGAATG-ATTTAGTGAGGTTTTCAGACCGGTACGCGATG---ACGTTTCG-ACGTTATCGATGT-CGTTGGGAAGATGACCAAACTTGATCATTTA
Tenebrio      CGATTGAATG-ATTTAGTGAGGTCTTC-------------------------------------------------------------------------
Dynastes      CGATTGAATG-ATTTAGTGAGGTCTTCGGACCGGTGCGCGGTTGCGTTAAGTTACTACGTCGCCGATGTTGCTGGGAAGATGACCAAACTTGATCATTTA
Xanthopygus   CGATTGAATG-ATTTAGTGAGGTCTTCGGATCGGTGCGCGGTG---GCGTTTCG-ACGTCGCCGATGT-TGCTGAAAAGATGACCAAACGTGATCATGT-
                                                               *******************************************========
Character excluded from all analyses indicated by a = in the line under the matrix; boundary regions indicated by *