firstpreviousnext

[1-100] [101-200] [201-300] [301-400] [401-500] [501-600] [601-700] [701-800] [801-900] [901-1000] [1001-1100] [1101-1200] [1201-1300] [1301-1400] [1401-1500] [1501-1600] [1601-1700] [1701-1800] [1801-1900] [1901-2000] [2001-2100] [2101-2200] [2201-2300] [2301-2400] [2401-2411]


18S rDNA from 40 beetle species

Data matrix used in Maddison, D.R., Baker, M.D., and Ober, K.A. In press.A preliminary phylogenetic analysis of 18S ribosomal DNA of carabid beetles (Coleoptera: Carabidae). Boll. Mus. reg. Sci. nat. Torino.

Sites 1001 through 1100

Calybe        ---------------------------------------------------------------TCCGACTT-ATA---------------AATCCTGTCG
Cymindis      ---------------------------------------------------------------TCCGACTT-ATA---------------AATCCTGTCG
Amara         ---------------------------------------------------------------TCCGACTT-ATA---------------AATCCTGTCG
Agonum        ---------------------------------------------------------------TCCGACTTTTTA---------------AATCCTGTCG
Discoderus    ---------------------------------------------------------------TCCGACTT-ATA---------------AATCCTGTCG
Chlaenius     ---------------------------------------------------------------TCCGACTTTATA---------------AATCCTGTCG
Loxandrus     ---------------------------------------------------------------TCCGACTTTTAT---------------AATCCTGTCG
Pterostichus  ---------------------------------------------------------------TCCGACTT-ATA---------------AATCCTGTCG
Galerita      ---------------------------------------------------------------TCCGACATTTTA--------------AATTCCTATCG
Pseudaptinus  GTACAGGGTATTTATTTATTCAATCATCCATTATCATACTACA--------------------TCCGACATTTTT-------------AATTTCCTGTCG
Pseudomorpha  ------------------------TTTAAATTTAAACCTGCTCA-------------------TCCGACTTTTATGTA------------AATCCTGTCG
Morion        -------------------------------------TCCGACTTATTTGTAATAAAATAAAATCCGACTTATTTGTAATAAAATAA---AATCCTGTCA
Psydrus       ----------------GTTTAACTATGCTCATTATGTTCAAAC-------TA-----------TCCTACAA-CG----------------AATCCTGTCG
Diplous       -------GTTATACGCGTGGTGGGTGTGTGGGGTTCCGTAGTGGTACCG--------------TCCGACTAACG----------------AATCCTGTCG
Patrobus      ---------------------TGGTGTGTGGGGTGCCGTTGTGGTACCG--------------TCCGACTAACG----------------AATCCTGTCG
Zolus         ----------------------TGTTGTCAGTGTTCAAATGACTCACCG--------------TCCGACTAAAT----------------AATCCTGTCG
Sloaneana     ---------------------------------------------------------------TCCGACTCAAT----------------AATCCTGTCG
Diplochaetus  ---------------------GTGGGGTTACAAATCAATCCACA-------------------TCCGACTCTAAAA--------------AATCCTGTCG
Pericompsus   -------------------------------------------CA------------------TCCGACTCAAT----------------AATCCTGTCG
Bembidion     -----------------TGTGTCACC--------------A----------------------TCCGACTCAAT----------------AATCCTGTCG
Asaphidion    ---------------------------------------------------------------TCCGACTCAAT----------------AATCCTGTCG
Trechus       -------------------------------------------A-------------------TCCGACTAACT----------------AATCCTGTCG
Pasimachus    ---------------------------------------------------------------TTCAACTTTATATTTAT-------AAAGATCCTGTCA
Scarites      ---------------------------------------------------------------TTCGACATTTTTA-----------AATGATCCTGTCA
Clivina       --------------------TTGTTATTTAAATACAACA------------------------TCCGACTTTTTTTTATTAAATAA-AAGATTCCTGTCA
Schizogenius  --------------------CGCTTCA------------------------------------TCCGACTTTTTTTATA--------AAGATTCCTGTCA
Dyschirius    ---------------------------------------------------------------TCCGACTTTTAT------------AAGATTCCTGTCA
Loricera      ---------------------------------------------------------------TCCGGTTTTTTGTTAAA----------AATCCTGTCC
Calosoma      ---------------------------------------------------------------TCCGACTCAAC----------------AATCCTGTCG
Scaphinotus   ---------------------------------------------------------------TCCGACTCAAA----------------AATCCTGTCG
Elaphrus      ------------------------------------------CG-------------------TCCGACTTACG----------------AATCCTGTCG
Blethisa      -------------------------------------------G-------------------TCCGACTTACG----------------AATCCTGTCG
Notiophilus   ---------------------------------------------------------------TCCGACTTTTTTA--------------AATCCTGTCG
Nebria        ---------------------------------------------------------------TCCGATTTTTATA--------------AATCCTGTCG
Leistus       ---------------------------------------------------------------TCCGACTTTTATA--------------AATCCTGTCG
T. holmbergi  -----------------------ATTTT------------GCAGTACCA--------------TCCGACTTTT-----------------AATCCTGTCG
T. gibbsii    -----------------------------------ATTTTGCAGTACCA--------------TCCGACTTTT-----------------AATCCTGTCG
Tenebrio      ---------------------------------------------------------------CCCAACTC-------------------AATCCCGCCG
Dynastes      ---------------------------------------------------------------TCCAACTTCA-----------------AATCCCACCG
Xanthopygus   ---------------------------------------------------------------CTCAACTTGA-----------------AATCCCATCG
              ===============================================================       ====================          
Character excluded from all analyses indicated by a = in the line under the matrix; boundary regions indicated by *